Multiple sequence alignment -- the gateway to further analysis
نویسندگان
چکیده
منابع مشابه
Multiple Sequence Alignment - The Gateway to Further Analysis
Whether the ultimate aim is a phylogenetic analysis of several orthologues, the identification of a pattern for particular feature or motif, or the basis for structural modelling, multiple sequence alignments allow the researcher to gather more biological information than a single sequence can offer. Possibly the most popular method for comparing three or more sequences is the clustering algori...
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We present an application of ABS algorithms for multiple sequence alignment (MSA). The Markov decision process (MDP) based model leads to a linear programming problem (LPP), whose solution is linked to a suggested alignment. The important features of our work include the facility of alignment of multiple sequences simultaneously and no limit for the length of the sequences. Our goal here is to ...
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An algorithm for progressive multiple alignment of sequences with insertions " , 1. Introduction The problem of sequence alignment is to find the patterns of sequence conservation and similarity between pairs or sets of given sequences. In biological contexts, similarity between biological sequences usually amounts to either functional or structural similarities or divergence from a common ance...
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In biological sequence processing, Multiple Sequence Alignment (MSA) techniques capture information about long-distance dependencies and the three-dimensional structure of protein and nucleotide sequences without resorting to polynomial complexity context-free models. But MSA techniques have rarely been used in natural language (NL) processing, and never for NL morphology induction. Our MetaMor...
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With the addition of more data in the field of proteomics, the computational methods need to be more efficient. The fraction or the part of molecular sequence that is more resistant to change is functionally more important to the molecule. Comparative approaches are used to ensure the reliability of sequence alignment. The problem of multiple sequence alignment (MSA) is a proposition of evoluti...
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ژورنال
عنوان ژورنال: Briefings in Bioinformatics
سال: 2002
ISSN: 1467-5463,1477-4054
DOI: 10.1093/bib/3.3.303